STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmpB_2NitT/TauT family transport system permease protein. (250 aa)    
Predicted Functional Partners:
tauB
NitT/TauT family transport system ATP-binding protein.
 
 
 0.972
SFH47827.1
NitT/TauT family transport system substrate-binding protein.
 
 
  0.944
ssuC_5
NitT/TauT family transport system permease protein.
 
    
0.838
lldR_3
Transcriptional regulator, GntR family.
 
     0.754
nasA
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.735
SFG72607.1
Putative hydroxymethylpyrimidine transport system substrate-binding protein.
 
 
 0.732
ssuB_1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.706
SFG37934.1
NitT/TauT family transport system substrate-binding protein.
  
 
 0.693
ssuC_4
Putative hydroxymethylpyrimidine transport system permease protein.
  
  
  0.678
SFG72326.1
NitT/TauT family transport system substrate-binding protein.
  
 
 0.638
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.