STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH48687.1Hypothetical protein. (45 aa)    
Predicted Functional Partners:
lpd
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component.
       0.773
mhqO_3
Glyoxalase family protein.
       0.697
SFH48666.1
Phospholipase/carboxylesterase.
       0.697
SFH48613.1
Transmembrane secretion effector.
       0.697
yhhW
Hypothetical protein; Belongs to the pirin family.
       0.697
aldHT
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
       0.487
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.