STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metC_2Cystathionine beta-lyase. (398 aa)    
Predicted Functional Partners:
cysK
Cysteine synthase A.
 0.904
metA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
 
 
 0.879
SFG93561.1
Cysteine synthase A.
 0.877
yitJ
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
 0.830
SFH41594.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
 
 0.828
sseA
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
 
 
 0.814
SFG26456.1
O-acetylhomoserine sulfhydrylase.
 
 
0.809
hom
Homoserine dehydrogenase.
  
 
 0.793
cysE
Serine O-acetyltransferase.
  
 
 0.769
patB
Cystathione beta-lyase.
 
 
 0.768
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.