Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RF_0026TPR repeats. (549 aa)    
Predicted Functional Partners:
RF_0047
Cell surface antigen-like protein Sca10.
 
 0.705
RF_0025
Unknown.
 
     0.676
RF_1099
Ankyrin repeat.
  
 
  0.653
htpG
Heat shock protein HtpG; Molecular chaperone. Has ATPase activity.
   
  0.641
RF_1306
Ankyrin repeat.
  
 
  0.634
RF_0922
Ankyrin repeat.
  
 
  0.600
RF_0580
Ankyrin repeat.
  
 
  0.598
spoT13
Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog; Containing ankyrin repeat.
  
 
  0.591
RF_0939
Ankyrin repeat.
  
 
  0.591
rpoA
DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.589
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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