STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF_0077Unknown. (199 aa)    
Predicted Functional Partners:
RF_0182
ABC transporter substrate binding protein.
 
 0.994
vacJ
VacJ lipoprotein precursor; Belongs to the MlaA family.
 
 
 
 0.979
RF_0080
ABC transporter permease protein; Could be part of an ABC transporter complex; Belongs to the MlaE permease family.
 
 
 0.943
mkl
Ribonucleotide ABC transporter ATP-binding protein.
  
 
 0.931
RF_0075
Unknown.
       0.737
RF_0053
Putative surface antigen.
  
 
   0.518
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
    0.501
kpsF
KpsF protein; Belongs to the SIS family. GutQ/KpsF subfamily.
       0.460
prs
Ribose-phosphate pyrophosphokinase; PRPP synthetase.
       0.456
aatA
Aspartate aminotransferase A; Catalyzes the reversible conversion of aspartate and 2- oxoglutarate to glutamate and oxaloacetate. Can also transaminate prephenate in the presence of glutamate. Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
     
 0.413
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.