abcT1 protein (Rickettsia felis) - STRING interaction network

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Score

abcT1

ABC transporter ATP-binding protein; Two ATP-biding cassettes. (555 aa)

Predicted Functional Partners:

rplW

0.800

RF_0114

0.781

rplU

0.777

rpsC

0.775

rplD

0.770

rpsO

0.769

rpmD

0.768

rpmH

0.766

rpsJ

0.764

rplC

0.764

Your Current Organism:

Rickettsia felis

NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RF_0114	abcT1	RF_0114	RF_0115	Unknown.	ABC transporter ATP-binding protein; Two ATP-biding cassettes.	0.781
abcT1	RF_0114	RF_0115	RF_0114	ABC transporter ATP-binding protein; Two ATP-biding cassettes.	Unknown.	0.781
abcT1	rplC	RF_0115	RF_0278	ABC transporter ATP-binding protein; Two ATP-biding cassettes.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.764
abcT1	rplD	RF_0115	RF_0279	ABC transporter ATP-binding protein; Two ATP-biding cassettes.	50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.770
abcT1	rplU	RF_0115	RF_1198	ABC transporter ATP-binding protein; Two ATP-biding cassettes.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.777
abcT1	rplW	RF_0115	RF_0280	ABC transporter ATP-binding protein; Two ATP-biding cassettes.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.800
abcT1	rpmD	RF_0115	RF_0296	ABC transporter ATP-binding protein; Two ATP-biding cassettes.	50S ribosomal protein L30.	0.768
abcT1	rpmH	RF_0115	RF_0348	ABC transporter ATP-binding protein; Two ATP-biding cassettes.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.766
abcT1	rpsC	RF_0115	RF_0284	ABC transporter ATP-binding protein; Two ATP-biding cassettes.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.775
abcT1	rpsJ	RF_0115	RF_0277	ABC transporter ATP-binding protein; Two ATP-biding cassettes.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.764
abcT1	rpsO	RF_0115	RF_0722	ABC transporter ATP-binding protein; Two ATP-biding cassettes.	30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.769
rplC	abcT1	RF_0278	RF_0115	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	ABC transporter ATP-binding protein; Two ATP-biding cassettes.	0.764
rplC	rplD	RF_0278	RF_0279	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.998
rplC	rplU	RF_0278	RF_1198	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.993
rplC	rplW	RF_0278	RF_0280	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.998
rplC	rpmD	RF_0278	RF_0296	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L30.	0.996
rplC	rpmH	RF_0278	RF_0348	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.946
rplC	rpsC	RF_0278	RF_0284	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.996
rplC	rpsJ	RF_0278	RF_0277	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rplC	rpsO	RF_0278	RF_0722	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.986