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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF_0165Superfamily I DNA and RNA helicase. (1028 aa)    
Predicted Functional Partners:
RF_0447
This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation.
 
     0.600
RF_0734
Unknown.
  
     0.593
RF_0853
Predicted NTPase; NACHT family, COG5635.
 
     0.578
RF_0624
Unknown.
 
 
   0.575
virB6_4
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.573
RF_1314
Opacity protein and related surface antigens COG3637.
  
     0.561
RF_0206
Unknown.
  
     0.548
virB6_1
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.540
virB6_3
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.537
sca13
Cell surface antigen-like protein Sca13; 219 kDa.
  
     0.535
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.