Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
rompBOuter membrane protein B; Cell surface antigen Sca5, 168 kDa. (1654 aa)    
Predicted Functional Partners:
gltA
Citrate synthase I.
      
 0.880
RF_1314
Opacity protein and related surface antigens COG3637.
  
   
 0.806
RF_0053
Putative surface antigen.
  
  
 0.804
virB6_1
TrbL/VirB6 plasmid Conjugative transfer protein.
  
    0.784
virB6_3
TrbL/VirB6 plasmid Conjugative transfer protein.
  
    0.781
virB6_4
TrbL/VirB6 plasmid Conjugative transfer protein.
  
    0.781
RF_0987
Ankyrin repeat.
  
     0.766
RF_1246
Unknown.
  
     0.764
tlyC
Hemolysin C; Belongs to the UPF0053 family. Hemolysin C subfamily.
      
 0.763
RF_0255
Unknown.
  
     0.755
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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