STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rmuCUncharacterized protein; Involved in DNA recombination. (428 aa)    
Predicted Functional Partners:
uvrD
DNA helicase II; Has both ATPase and helicase activities. Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present. Involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair (By similarity); Belongs to the helicase family. UvrD subfamily.
     
 0.565
RF_0624
Unknown.
 
     0.544
RF_0260
TPR repeats.
       0.524
rompB
Outer membrane protein B; Cell surface antigen Sca5, 168 kDa.
  
     0.511
virB6_1
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.509
RF_0915
Methylated-DNA--protein-cysteine methyltransferase.
       0.497
dat
Methylated-DNA--protein-cysteine methyltransferase.
       0.497
virB6_3
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.490
RF_0670
Predicted membrane protein.
 
     0.488
asmA
Outer membrane assembly protein.
 
     0.478
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.