STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF_0313Unknown. (92 aa)    
Predicted Functional Partners:
RF_0479
Unknown.
 
 
   0.862
RF_0755
Conserved hypothetical protein.
 
 
   0.759
RF_0757
Unknown.
  
     0.725
RF_0471
Phage portal protein; Belongs to the phage portal family. HK97 subfamily.
 
 
   0.722
RF_0749
Phage prohead protease (HK97 family) and phage major capsid protein (HK97 family).
 
 
   0.700
RF_0570
Phage uncharacterized protein; Terminase large subunit.
 
     0.681
virB8_2
VirB8 protein.
  
     0.620
virB3
Type IV secretory pathway, VirB3-like protein.
  
     0.589
RF_0750
Phage prohead protease (HK97 family) and phage major capsid protein (HK97 family).
 
 
   0.578
virD4
VirD4 protein.
  
     0.536
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.