STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcT3Multidrug resistance ABC transporter ATP-binding protein. (589 aa)    
Predicted Functional Partners:
atm1
Multidrug resistance protein Atm1.
  
 
0.781
RF_0260
TPR repeats.
   
 0.724
RF_1175
TPR repeats.
   
 0.720
aas
2-acylglycerophosphoethanolamine acyltransferase.
  
 0.573
RF_0543
Two-domain glycosyltransferase; Belongs to the glycosyltransferase 2 family.
 
 
 0.539
RF_0332
Unknown.
       0.507
hscA
Heat shock protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB (By similarity).
 
 0.503
dnaK
DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.494
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.440
RF_0080
ABC transporter permease protein; Could be part of an ABC transporter complex; Belongs to the MlaE permease family.
  
   0.439
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.