| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cydA | cydB | RF_0333 | RF_0336 | Cytochrome d ubiquinol oxidase subunit I. | Cytochrome d ubiquinol oxidase subunit II. | 0.999 |
| cydA | grpE | RF_0333 | RF_0402 | Cytochrome d ubiquinol oxidase subunit I. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.672 |
| cydA | nuoH | RF_0333 | RF_1261 | Cytochrome d ubiquinol oxidase subunit I. | NADH dehydrogenase I chain H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. | 0.655 |
| cydA | nuoI | RF_0333 | RF_1260 | Cytochrome d ubiquinol oxidase subunit I. | NADH dehydrogenase I chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.620 |
| cydA | nuoK | RF_0333 | RF_1256 | Cytochrome d ubiquinol oxidase subunit I. | NADH dehydrogenase I chain K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. | 0.624 |
| cydA | nuoN1 | RF_0333 | RF_0854 | Cytochrome d ubiquinol oxidase subunit I. | NADH:ubiquinone oxidoreductase subunit 2 (chain N); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. | 0.635 |
| cydA | petB | RF_0333 | RF_1009 | Cytochrome d ubiquinol oxidase subunit I. | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.621 |
| cydA | sdhA | RF_0333 | RF_1159 | Cytochrome d ubiquinol oxidase subunit I. | Succinate dehydrogenase flavoprotein subunit. | 0.692 |
| cydA | sdhB | RF_0333 | RF_0136 | Cytochrome d ubiquinol oxidase subunit I. | Succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.690 |
| cydA | sdhC | RF_0333 | RF_1163 | Cytochrome d ubiquinol oxidase subunit I. | Succinate dehydrogenase cytochrome b-556 subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | 0.725 |
| cydB | cydA | RF_0336 | RF_0333 | Cytochrome d ubiquinol oxidase subunit II. | Cytochrome d ubiquinol oxidase subunit I. | 0.999 |
| cydB | grpE | RF_0336 | RF_0402 | Cytochrome d ubiquinol oxidase subunit II. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.410 |
| cydB | nuoH | RF_0336 | RF_1261 | Cytochrome d ubiquinol oxidase subunit II. | NADH dehydrogenase I chain H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. | 0.690 |
| cydB | nuoI | RF_0336 | RF_1260 | Cytochrome d ubiquinol oxidase subunit II. | NADH dehydrogenase I chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.602 |
| cydB | nuoK | RF_0336 | RF_1256 | Cytochrome d ubiquinol oxidase subunit II. | NADH dehydrogenase I chain K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. | 0.650 |
| cydB | nuoN1 | RF_0336 | RF_0854 | Cytochrome d ubiquinol oxidase subunit II. | NADH:ubiquinone oxidoreductase subunit 2 (chain N); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. | 0.606 |
| cydB | petB | RF_0336 | RF_1009 | Cytochrome d ubiquinol oxidase subunit II. | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.594 |
| cydB | sdhA | RF_0336 | RF_1159 | Cytochrome d ubiquinol oxidase subunit II. | Succinate dehydrogenase flavoprotein subunit. | 0.664 |
| cydB | sdhB | RF_0336 | RF_0136 | Cytochrome d ubiquinol oxidase subunit II. | Succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.646 |
| cydB | sdhC | RF_0336 | RF_1163 | Cytochrome d ubiquinol oxidase subunit II. | Succinate dehydrogenase cytochrome b-556 subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | 0.774 |