Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RF_0063 | RF_0883 | RF_0063 | RF_0883 | Ankyrin repeat. | Unknown. | 0.718 |
| RF_0063 | rickA | RF_0063 | RF_0371 | Ankyrin repeat. | Actin polymerization protein RickA; Recruits and activates the Arp2/3 complex, which in turn leads to actin polymerization, promoting Rickettsia motility during infection. | 0.584 |
| RF_0543 | pal | RF_0543 | RF_1234 | Two-domain glycosyltransferase; Belongs to the glycosyltransferase 2 family. | Peptidoglycan-associated lipoprotein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.567 |
| RF_0543 | rickA | RF_0543 | RF_0371 | Two-domain glycosyltransferase; Belongs to the glycosyltransferase 2 family. | Actin polymerization protein RickA; Recruits and activates the Arp2/3 complex, which in turn leads to actin polymerization, promoting Rickettsia motility during infection. | 0.510 |
| RF_0596 | RF_0883 | RF_0596 | RF_0883 | Unknown. | Unknown. | 0.578 |
| RF_0596 | rickA | RF_0596 | RF_0371 | Unknown. | Actin polymerization protein RickA; Recruits and activates the Arp2/3 complex, which in turn leads to actin polymerization, promoting Rickettsia motility during infection. | 0.454 |
| RF_0883 | RF_0063 | RF_0883 | RF_0063 | Unknown. | Ankyrin repeat. | 0.718 |
| RF_0883 | RF_0596 | RF_0883 | RF_0596 | Unknown. | Unknown. | 0.578 |
| RF_0883 | rickA | RF_0883 | RF_0371 | Unknown. | Actin polymerization protein RickA; Recruits and activates the Arp2/3 complex, which in turn leads to actin polymerization, promoting Rickettsia motility during infection. | 0.474 |
| dsbA | rickA | RF_0662 | RF_0371 | Thiol:disulfide interchange protein DsbA. | Actin polymerization protein RickA; Recruits and activates the Arp2/3 complex, which in turn leads to actin polymerization, promoting Rickettsia motility during infection. | 0.461 |
| pal | RF_0543 | RF_1234 | RF_0543 | Peptidoglycan-associated lipoprotein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | Two-domain glycosyltransferase; Belongs to the glycosyltransferase 2 family. | 0.567 |
| pal | rickA | RF_1234 | RF_0371 | Peptidoglycan-associated lipoprotein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | Actin polymerization protein RickA; Recruits and activates the Arp2/3 complex, which in turn leads to actin polymerization, promoting Rickettsia motility during infection. | 0.478 |
| pal | tolB | RF_1234 | RF_0492 | Peptidoglycan-associated lipoprotein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | TolB protein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.978 |
| pal | tolQ | RF_1234 | RF_0504 | Peptidoglycan-associated lipoprotein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | TolQ protein. | 0.869 |
| pal | tolR | RF_1234 | RF_0505 | Peptidoglycan-associated lipoprotein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | TolR protein. | 0.828 |
| pld | rickA | RF_1297 | RF_0371 | Phospholipase D (PLD) superfamily protein; Could be a virulence factor; Belongs to the phospholipase D family. | Actin polymerization protein RickA; Recruits and activates the Arp2/3 complex, which in turn leads to actin polymerization, promoting Rickettsia motility during infection. | 0.544 |
| rickA | RF_0063 | RF_0371 | RF_0063 | Actin polymerization protein RickA; Recruits and activates the Arp2/3 complex, which in turn leads to actin polymerization, promoting Rickettsia motility during infection. | Ankyrin repeat. | 0.584 |
| rickA | RF_0543 | RF_0371 | RF_0543 | Actin polymerization protein RickA; Recruits and activates the Arp2/3 complex, which in turn leads to actin polymerization, promoting Rickettsia motility during infection. | Two-domain glycosyltransferase; Belongs to the glycosyltransferase 2 family. | 0.510 |
| rickA | RF_0596 | RF_0371 | RF_0596 | Actin polymerization protein RickA; Recruits and activates the Arp2/3 complex, which in turn leads to actin polymerization, promoting Rickettsia motility during infection. | Unknown. | 0.454 |
| rickA | RF_0883 | RF_0371 | RF_0883 | Actin polymerization protein RickA; Recruits and activates the Arp2/3 complex, which in turn leads to actin polymerization, promoting Rickettsia motility during infection. | Unknown. | 0.474 |
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