STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoT12Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog. (134 aa)    
Predicted Functional Partners:
spoT15
Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog.
 
     0.976
spoT7
Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog.
 
     0.976
spoT8
Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog.
 
     0.976
spoT1
Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog.
 
     0.976
spoT10
Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog.
 
     0.976
spoT3
Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog.
 
     0.975
spoT9
Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog.
 
     0.974
spoT2
Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog.
 
     0.953
rplB
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
   
   0.781
rpsE
30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
   
   0.779
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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