STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF_0601Antitoxin of toxin-antitoxin system StbD; Antitoxin component of a type II toxin-antitoxin (TA) system. (75 aa)    
Predicted Functional Partners:
RF_0602
Cytotoxic translational repressor of toxin-antitoxin system RelE; COG2026.
   
 
 0.760
RF_0490
Probable toxin of toxin-antitoxin system.
  
 
 0.607
RF_0792
Probable toxin of toxin-antitoxin system.
  
 
 0.607
RF_0911
Probable toxin of toxin-antitoxin system.
  
 
 0.607
proS
Prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily.
       0.584
RF_0016
Probable toxin of toxin-antitoxin system.
   
 
 0.555
RF_0898
Cytotoxic translational repressor of toxin-antitoxin system RelE; COG2026.
   
 
 0.555
RF_0956
Cytotoxic translational repressor of toxin-antitoxin system RelE; COG2026.
   
 
 0.555
RF_1272
Cytotoxic translational repressor of toxin-antitoxin system RelE; COG2026.
   
 
 0.555
RF_1286
Cytotoxic translational repressor of toxin-antitoxin system RelE; COG2026.
   
 
 0.555
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.