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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF_0670Predicted membrane protein. (141 aa)    
Predicted Functional Partners:
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
       0.793
RF_0671
Unknown.
 
     0.786
virB6_1
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.763
virB6_3
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.762
virB6_4
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.757
RF_0053
Putative surface antigen.
  
     0.749
RF_1246
Unknown.
  
     0.738
sca13
Cell surface antigen-like protein Sca13; 219 kDa.
  
     0.726
virB6_5
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.724
sca3
Cell surface antigen Sca3; 319 kDa.
  
     0.721
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.