STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF_0704Unknown. (145 aa)    
Predicted Functional Partners:
RF_0705
P pilus assembly protein FimD; Porin PapC; fimbrial Usher protein.
 
 
 0.984
RF_0706
P pilus assembly protein FimD; Porin PapC (fimbrial Usher protein).
 
 
 0.980
RF_0703
Unknown; Similar to late-developmental spore coat protein.
 
 
 0.973
RF_0707
Unknown.
 
 
 0.924
addA
Erythrocyte adducin alpha subunit.
  
     0.538
RF_0479
Unknown.
  
    0.534
RF_0972
Unknown.
  
    0.534
RF_0701
Toxin of toxin-antitoxin system; Containing PIN domain for nucleic acid binding.
       0.489
RF_0702
Antitoxin of toxin-antitoxin system Phd; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.489
RF_0399
MFS type sugar transporter; PFAM00083.
  
     0.479
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.