STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF_0779Antitoxin of toxin-antitoxin system Phd; Antitoxin component of a type II toxin-antitoxin (TA) system. (83 aa)    
Predicted Functional Partners:
RF_0956
Cytotoxic translational repressor of toxin-antitoxin system RelE; COG2026.
 
 
 
 0.747
RF_0490
Probable toxin of toxin-antitoxin system.
  
 
 0.608
RF_0792
Probable toxin of toxin-antitoxin system.
  
 
 0.608
RF_0911
Probable toxin of toxin-antitoxin system.
  
 
 0.608
RF_0898
Cytotoxic translational repressor of toxin-antitoxin system RelE; COG2026.
 
 
 
 0.606
RF_1286
Cytotoxic translational repressor of toxin-antitoxin system RelE; COG2026.
 
 
 
 0.596
RF_1272
Cytotoxic translational repressor of toxin-antitoxin system RelE; COG2026.
 
 
 
 0.570
RF_0016
Probable toxin of toxin-antitoxin system.
 
 
 
 0.486
RF_0777
Predicted metal-dependent hydrolases; Related to alanyl-tRNA synthetase HxxxH domain.
       0.449
RF_0778
Unknown.
       0.449
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.