STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mccF2Microcin C7 resistance protein. (301 aa)    
Predicted Functional Partners:
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
    0.785
ampD
AmpD protein homolog.
  
   
 0.714
acrF
Hydrophobe/amphiphile efflux-1 HAE1 family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
      
 0.618
blaD
Beta-lactamase Class D.
      
 0.608
RF_0818
Unknown.
       0.581
RF_0815
Na+/proline symporter and signal transduction histidine kinase; Sodium:solute symporter family, SSF.
     
 0.505
pat1
Patatin-like phospholipase.
      
 0.471
tme
Malate oxidoreductase and phosphate acetyltransferase.
       0.462
RF_0819
Unknown.
       0.416
RF_0814
Na+/proline symporter and signal transduction histidine kinase; Sodium:solute symporter family, SSF; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.413
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
Server load: medium (54%) [HD]