Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ntrXNitrogen assimilation regulatory protein NtrX; Member of the two-component regulatory system RF_0895/RF_0427. (475 aa)    
Predicted Functional Partners:
ntrY
Nitrogen regulation protein NtrY; Member of the two-component regulatory system RF_0427/RF_0895.
 
 0.994
RF_0896
Uncharacterized low-complexity protein; COG1357.
  
    0.857
RF_0815
Na+/proline symporter and signal transduction histidine kinase; Sodium:solute symporter family, SSF.
   
 
 0.795
envZ
Osmolarity sensor protein EnvZ.
 
 
 
 0.777
RF_1281
Conserved hypothetical protein.
 
  
 0.757
RF_1043
Conserved hypothetical protein.
 
  
 0.755
barA
Histidine kinase sensor protein.
  
 
 0.607
RF_1175
TPR repeats.
   
 
 0.601
manC
Mannose-1-phosphate guanylyltransferase.
     
 0.589
dksA
DnaK suppressor protein homolog; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.
 
  
 0.583
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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