Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
RF_0896Uncharacterized low-complexity protein; COG1357. (589 aa)    
Predicted Functional Partners:
ntrX
Nitrogen assimilation regulatory protein NtrX; Member of the two-component regulatory system RF_0895/RF_0427.
  
    0.857
virB6_5
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.742
sca1
Cell surface antigen Sca1; 212 kDa.
  
     0.670
RF_0053
Putative surface antigen.
  
    0.624
gcvT
Glycine cleavage T-protein; Aminomethyl transferase; Belongs to the GcvT family.
  
     0.573
ubiH
2-polyprenyl-6-methoxyphenol 4-hydroxylase.
  
     0.562
virB6_3
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.476
virB6_4
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.465
virB6_1
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.456
sam
S-adenosylmethionine transporter; Transports S-adenosylmethionine; Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (DME) (TC 2.A.7.3) family.
 
 
   0.439
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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