Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RF_0907 | RF_0908 | RF_0907 | RF_0908 | Unknown. | Unknown. | 0.987 |
RF_0907 | RF_0909 | RF_0907 | RF_0909 | Unknown. | Unknown. | 0.881 |
RF_0907 | dnaK | RF_0907 | RF_1084 | Unknown. | DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.418 |
RF_0907 | hscA | RF_0907 | RF_1063 | Unknown. | Heat shock protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB (By similarity). | 0.418 |
RF_0908 | RF_0907 | RF_0908 | RF_0907 | Unknown. | Unknown. | 0.987 |
RF_0908 | RF_0909 | RF_0908 | RF_0909 | Unknown. | Unknown. | 0.946 |
RF_0908 | RF_0910 | RF_0908 | RF_0910 | Unknown. | Antitoxin of toxin-antitoxin system StbD; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.522 |
RF_0908 | RF_0911 | RF_0908 | RF_0911 | Unknown. | Probable toxin of toxin-antitoxin system. | 0.520 |
RF_0908 | dnaK | RF_0908 | RF_1084 | Unknown. | DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.418 |
RF_0908 | hscA | RF_0908 | RF_1063 | Unknown. | Heat shock protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB (By similarity). | 0.418 |
RF_0909 | RF_0907 | RF_0909 | RF_0907 | Unknown. | Unknown. | 0.881 |
RF_0909 | RF_0908 | RF_0909 | RF_0908 | Unknown. | Unknown. | 0.946 |
RF_0909 | RF_0910 | RF_0909 | RF_0910 | Unknown. | Antitoxin of toxin-antitoxin system StbD; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.522 |
RF_0909 | RF_0911 | RF_0909 | RF_0911 | Unknown. | Probable toxin of toxin-antitoxin system. | 0.521 |
RF_0909 | dnaK | RF_0909 | RF_1084 | Unknown. | DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.418 |
RF_0909 | hscA | RF_0909 | RF_1063 | Unknown. | Heat shock protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB (By similarity). | 0.418 |
RF_0910 | RF_0908 | RF_0910 | RF_0908 | Antitoxin of toxin-antitoxin system StbD; Antitoxin component of a type II toxin-antitoxin (TA) system. | Unknown. | 0.522 |
RF_0910 | RF_0909 | RF_0910 | RF_0909 | Antitoxin of toxin-antitoxin system StbD; Antitoxin component of a type II toxin-antitoxin (TA) system. | Unknown. | 0.522 |
RF_0910 | RF_0911 | RF_0910 | RF_0911 | Antitoxin of toxin-antitoxin system StbD; Antitoxin component of a type II toxin-antitoxin (TA) system. | Probable toxin of toxin-antitoxin system. | 0.978 |
RF_0911 | RF_0908 | RF_0911 | RF_0908 | Probable toxin of toxin-antitoxin system. | Unknown. | 0.520 |
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