STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF_0922Ankyrin repeat. (179 aa)    
Predicted Functional Partners:
RF_1175
TPR repeats.
  
 0.790
RF_0950
Ankyrin repeat; Partial match with predicted glutamine amidotransferases, COG2071.
  
     0.773
RF_1099
Ankyrin repeat.
  
     0.773
RF_1306
Ankyrin repeat.
  
     0.773
RF_0580
Ankyrin repeat.
  
     0.772
RF_0939
Ankyrin repeat.
  
     0.772
RF_1087
Ankyrin repeat.
  
     0.771
RF_0314
Ankyrin repeat.
  
     0.769
RF_0260
TPR repeats.
  
  0.767
RF_0026
TPR repeats.
  
  0.648
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.