STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF_0940Uncharacterized protein; NT (nucleotidyltransferase) domain and HEPN (higher eukarytoes and prokaryotes nucleotide-binding) domain. (289 aa)    
Predicted Functional Partners:
RF_0386
Unknown.
  
     0.723
RF_0385
Unknown.
  
     0.575
RF_1074
Unknown; MJ0042 family finger-like domain.
  
     0.472
sca13
Cell surface antigen-like protein Sca13; 219 kDa.
  
     0.466
virB6_1
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.458
virB6_4
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.454
RF_0939
Ankyrin repeat.
       0.427
RF_0431
Unknown.
  
     0.426
rompB
Outer membrane protein B; Cell surface antigen Sca5, 168 kDa.
  
     0.422
RF_0987
Ankyrin repeat.
  
     0.420
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.