STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF_0956Cytotoxic translational repressor of toxin-antitoxin system RelE; COG2026. (90 aa)    
Predicted Functional Partners:
RF_0898
Cytotoxic translational repressor of toxin-antitoxin system RelE; COG2026.
  
   
 0.824
RF_0957
Probable antitoxin of toxin-antitoxin system.
     
 0.823
RF_1272
Cytotoxic translational repressor of toxin-antitoxin system RelE; COG2026.
  
   
 0.780
RF_0779
Antitoxin of toxin-antitoxin system Phd; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.747
relB1
DNA-damage-inducible protein J.
  
   0.497
relB2
DNA-damage-inducible protein J.
  
   0.497
yajC
Preprotein translocase YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
       0.483
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
       0.483
RF_1286
Cytotoxic translational repressor of toxin-antitoxin system RelE; COG2026.
  
   
 0.452
RF_0015
Antitoxin of toxin-antitoxin system StbD; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.418
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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