STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF_0972Unknown. (437 aa)    
Predicted Functional Partners:
RF_0755
Conserved hypothetical protein.
   
   0.787
RF_0749
Phage prohead protease (HK97 family) and phage major capsid protein (HK97 family).
   
   0.658
RF_0411
Chitinase.
     
 0.623
manC
Mannose-1-phosphate guanylyltransferase.
  
  
 0.610
RF_0704
Unknown.
  
    0.534
aas
2-acylglycerophosphoethanolamine acyltransferase.
     
 0.522
RF_0310
Tetratricopeptide repeat domain containing protein.
  
  
 0.478
RF_0751
Unknown.
   
   0.463
RF_0471
Phage portal protein; Belongs to the phage portal family. HK97 subfamily.
   
   0.461
RF_0313
Unknown.
   
   0.453
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.