STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF_0986Unknown. (132 aa)    
Predicted Functional Partners:
tolC
Type I secretion outer membrane protein, TolC family.
 
     0.836
parB
ParB-like partition proteins; Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication (By similarity).
    
 
 0.818
RF_0757
Unknown.
  
     0.639
RF_1314
Opacity protein and related surface antigens COG3637.
  
     0.622
RF_1195
ABC-type transport systems periplasmic component.
  
     0.603
RF_0987
Ankyrin repeat.
 
     0.578
RF_0983
Unknown.
       0.481
RF_0984
Unknown.
       0.481
RF_0506
Periplasmic protein TonB; Linking inner and outer membranes.
  
     0.463
RF_0313
Unknown.
  
     0.442
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.