RF_0992 protein (Rickettsia felis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

RF_0992

Unknown. (220 aa)

Predicted Functional Partners:

RF_0993

0.942

hisS

0.774

cpoB

0.759

rplM

0.670

rpsI

0.591

rlpA

0.406

Your Current Organism:

Rickettsia felis

NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RF_0992	RF_0993	RF_0992	RF_0993	Unknown.	WD40-like repeat.	0.942
RF_0992	cpoB	RF_0992	RF_0991	Unknown.	Unknown; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.	0.759
RF_0992	hisS	RF_0992	RF_0498	Unknown.	Histidyl-tRNA synthetase.	0.774
RF_0992	rlpA	RF_0992	RF_0611	Unknown.	Rare lipoprotein A precursor; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.	0.406
RF_0992	rplM	RF_0992	RF_0994	Unknown.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.670
RF_0992	rpsI	RF_0992	RF_0995	Unknown.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.591
RF_0993	RF_0992	RF_0993	RF_0992	WD40-like repeat.	Unknown.	0.942
RF_0993	cpoB	RF_0993	RF_0991	WD40-like repeat.	Unknown; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.	0.809
RF_0993	hisS	RF_0993	RF_0498	WD40-like repeat.	Histidyl-tRNA synthetase.	0.454
RF_0993	rplM	RF_0993	RF_0994	WD40-like repeat.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.680
RF_0993	rpsI	RF_0993	RF_0995	WD40-like repeat.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.586
cpoB	RF_0992	RF_0991	RF_0992	Unknown; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.	Unknown.	0.759
cpoB	RF_0993	RF_0991	RF_0993	Unknown; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.	WD40-like repeat.	0.809
cpoB	rlpA	RF_0991	RF_0611	Unknown; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.	Rare lipoprotein A precursor; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.	0.845
cpoB	rplM	RF_0991	RF_0994	Unknown; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.580
cpoB	rpsI	RF_0991	RF_0995	Unknown; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.551
hisS	RF_0992	RF_0498	RF_0992	Histidyl-tRNA synthetase.	Unknown.	0.774
hisS	RF_0993	RF_0498	RF_0993	Histidyl-tRNA synthetase.	WD40-like repeat.	0.454
hisS	rlpA	RF_0498	RF_0611	Histidyl-tRNA synthetase.	Rare lipoprotein A precursor; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.	0.522
hisS	rplM	RF_0498	RF_0994	Histidyl-tRNA synthetase.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.456