Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RF_0997 | RF_0998 | RF_0997 | RF_0998 | Putative pterin-4-alpha-carbinolamine dehydratase (PHS); Pterin carbinolamine dehydratase (PCD). | Transposase. | 0.439 |
RF_0997 | ddpX | RF_0997 | RF_0996 | Putative pterin-4-alpha-carbinolamine dehydratase (PHS); Pterin carbinolamine dehydratase (PCD). | D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. | 0.475 |
RF_0997 | polA | RF_0997 | RF_1239 | Putative pterin-4-alpha-carbinolamine dehydratase (PHS); Pterin carbinolamine dehydratase (PCD). | DNA polymerase I (POL I); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.474 |
RF_0998 | RF_0997 | RF_0998 | RF_0997 | Transposase. | Putative pterin-4-alpha-carbinolamine dehydratase (PHS); Pterin carbinolamine dehydratase (PCD). | 0.439 |
ddpX | RF_0997 | RF_0996 | RF_0997 | D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. | Putative pterin-4-alpha-carbinolamine dehydratase (PHS); Pterin carbinolamine dehydratase (PCD). | 0.475 |
polA | RF_0997 | RF_1239 | RF_0997 | DNA polymerase I (POL I); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | Putative pterin-4-alpha-carbinolamine dehydratase (PHS); Pterin carbinolamine dehydratase (PCD). | 0.474 |