Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RF_0228 | RF_0543 | RF_0228 | RF_0543 | Unknown. | Two-domain glycosyltransferase; Belongs to the glycosyltransferase 2 family. | 0.907 |
RF_0228 | RF_0547 | RF_0228 | RF_0547 | Unknown. | Glycosyltransferase. | 0.547 |
RF_0228 | RF_0644 | RF_0228 | RF_0644 | Unknown. | Glycosyltransferase. | 0.547 |
RF_0228 | capD | RF_0228 | RF_0539 | Unknown. | CapD protein; Epimerizes UDP-galactose to UDP-glucose; Belongs to the polysaccharide synthase family. | 0.897 |
RF_0228 | exoC | RF_0228 | RF_0716 | Unknown. | Phosphomannomutase. | 0.422 |
RF_0228 | manC | RF_0228 | RF_0241 | Unknown. | Mannose-1-phosphate guanylyltransferase. | 0.860 |
RF_0228 | pheT | RF_0228 | RF_0648 | Unknown. | Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.509 |
RF_0228 | udg | RF_0228 | RF_1245 | Unknown. | UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.590 |
RF_0228 | uvrD | RF_0228 | RF_0687 | Unknown. | DNA helicase II; Has both ATPase and helicase activities. Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present. Involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair (By similarity); Belongs to the helicase family. UvrD subfamily. | 0.588 |
RF_0543 | RF_0228 | RF_0543 | RF_0228 | Two-domain glycosyltransferase; Belongs to the glycosyltransferase 2 family. | Unknown. | 0.907 |
RF_0543 | RF_0644 | RF_0543 | RF_0644 | Two-domain glycosyltransferase; Belongs to the glycosyltransferase 2 family. | Glycosyltransferase. | 0.433 |
RF_0543 | capD | RF_0543 | RF_0539 | Two-domain glycosyltransferase; Belongs to the glycosyltransferase 2 family. | CapD protein; Epimerizes UDP-galactose to UDP-glucose; Belongs to the polysaccharide synthase family. | 0.903 |
RF_0543 | exoC | RF_0543 | RF_0716 | Two-domain glycosyltransferase; Belongs to the glycosyltransferase 2 family. | Phosphomannomutase. | 0.674 |
RF_0543 | manC | RF_0543 | RF_0241 | Two-domain glycosyltransferase; Belongs to the glycosyltransferase 2 family. | Mannose-1-phosphate guanylyltransferase. | 0.919 |
RF_0543 | pheT | RF_0543 | RF_0648 | Two-domain glycosyltransferase; Belongs to the glycosyltransferase 2 family. | Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.660 |
RF_0543 | pta | RF_0543 | RF_0096 | Two-domain glycosyltransferase; Belongs to the glycosyltransferase 2 family. | Phosphate acetyltransferase Pta. | 0.491 |
RF_0543 | udg | RF_0543 | RF_1245 | Two-domain glycosyltransferase; Belongs to the glycosyltransferase 2 family. | UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.934 |
RF_0543 | uvrD | RF_0543 | RF_0687 | Two-domain glycosyltransferase; Belongs to the glycosyltransferase 2 family. | DNA helicase II; Has both ATPase and helicase activities. Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present. Involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair (By similarity); Belongs to the helicase family. UvrD subfamily. | 0.905 |
RF_0547 | RF_0228 | RF_0547 | RF_0228 | Glycosyltransferase. | Unknown. | 0.547 |
RF_0547 | RF_0644 | RF_0547 | RF_0644 | Glycosyltransferase. | Glycosyltransferase. | 0.613 |
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