Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
surAParvulin-like peptidyl-prolyl isomerase. (524 aa)    
Predicted Functional Partners:
omp1
Outer membrane protein omp1; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.804
RF_0987
Ankyrin repeat.
 
 
 
 0.785
RF_1314
Opacity protein and related surface antigens COG3637.
  
 
 
 0.726
cpoB
Unknown; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
 
   0.686
RF_1246
Unknown.
  
     0.666
virB6_4
TrbL/VirB6 plasmid Conjugative transfer protein.
  
     0.664
sca1
Cell surface antigen Sca1; 212 kDa.
  
   
 0.662
sca13
Cell surface antigen-like protein Sca13; 219 kDa.
  
     0.658
RF_0624
Unknown.
  
     0.657
rpsB
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.656
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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