Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ampCBeta-lactamase AmpC (Class C). (372 aa)    
Predicted Functional Partners:
RF_1366
Conserved hypothetical protein.
       0.746
pbpE
Penicillin-binding protein 4*.
  
     0.668
RF_1368
Cytotoxic translational repressor of toxin-antitoxin system RelE; COG2026.
       0.642
RF_0774
Streptomycin 6-kinase.
  
   
 0.552
RF_0667
Acylamino-acid-releasing enzyme.
  
     0.511
RF_0252
Unknown.
 
     0.459
blaD
Beta-lactamase Class D.
      
 0.435
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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