ampD protein (Rickettsia felis) - STRING interaction network

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

ampD

AmpD protein homolog. (248 aa)

Predicted Functional Partners:

rlpA

0.612

RF_0203

0.546

RF_0749

0.531

RF_0570

0.526

mccF2

0.518

mccF

0.516

RF_1382

0.466

kefB

0.463

murC

0.462

lipB

0.440

Your Current Organism:

Rickettsia felis

NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RF_0203	ampD	RF_0203	RF_1384	Beta-glucosidase.	AmpD protein homolog.	0.546
RF_0570	RF_0749	RF_0570	RF_0749	Phage uncharacterized protein; Terminase large subunit.	Phage prohead protease (HK97 family) and phage major capsid protein (HK97 family).	0.701
RF_0570	ampD	RF_0570	RF_1384	Phage uncharacterized protein; Terminase large subunit.	AmpD protein homolog.	0.526
RF_0749	RF_0570	RF_0749	RF_0570	Phage prohead protease (HK97 family) and phage major capsid protein (HK97 family).	Phage uncharacterized protein; Terminase large subunit.	0.701
RF_0749	ampD	RF_0749	RF_1384	Phage prohead protease (HK97 family) and phage major capsid protein (HK97 family).	AmpD protein homolog.	0.531
RF_1382	ampD	RF_1382	RF_1384	Uncharacterized conserved protein.	AmpD protein homolog.	0.466
RF_1382	lipB	RF_1382	RF_1383	Uncharacterized conserved protein.	Probable lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.	0.804
ampD	RF_0203	RF_1384	RF_0203	AmpD protein homolog.	Beta-glucosidase.	0.546
ampD	RF_0570	RF_1384	RF_0570	AmpD protein homolog.	Phage uncharacterized protein; Terminase large subunit.	0.526
ampD	RF_0749	RF_1384	RF_0749	AmpD protein homolog.	Phage prohead protease (HK97 family) and phage major capsid protein (HK97 family).	0.531
ampD	RF_1382	RF_1384	RF_1382	AmpD protein homolog.	Uncharacterized conserved protein.	0.466
ampD	kefB	RF_1384	RF_1283	AmpD protein homolog.	Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.	0.463
ampD	lipB	RF_1384	RF_1383	AmpD protein homolog.	Probable lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.	0.440
ampD	mccF	RF_1384	RF_0623	AmpD protein homolog.	Microcin C7 self-immunity protein.	0.516
ampD	mccF2	RF_1384	RF_0816	AmpD protein homolog.	Microcin C7 resistance protein.	0.518
ampD	murC	RF_1384	RF_1037	AmpD protein homolog.	UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.	0.462
ampD	rlpA	RF_1384	RF_0611	AmpD protein homolog.	Rare lipoprotein A precursor; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.	0.612
kefB	ampD	RF_1283	RF_1384	Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.	AmpD protein homolog.	0.463
lipB	RF_1382	RF_1383	RF_1382	Probable lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.	Uncharacterized conserved protein.	0.804
lipB	ampD	RF_1383	RF_1384	Probable lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.	AmpD protein homolog.	0.440