STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS21227.1KEGG: bce:BC1175 hypothetical cytosolic protein. (262 aa)    
Predicted Functional Partners:
ABS21228.1
KEGG: bca:BCE_1296 hypothetical protein; Belongs to the UPF0736 family.
 
     0.845
ABS23509.1
KEGG: btl:BALH_4189 hypothetical protein.
  
     0.736
ABS21546.1
KEGG: btl:BALH_1356 hypothetical protein.
  
     0.732
ABS23578.1
KEGG: btl:BALH_4274 hypothetical protein.
  
     0.723
ABS21191.1
PFAM: ComK family protein; KEGG: bca:BCE_1236 competence transcription factor, putative.
  
     0.694
ABS20762.1
KEGG: btl:BALH_0419 hypothetical protein.
  
     0.682
ABS23759.1
TIGRFAM: Spore coat protein YutH; KEGG: bce:BC4954 CotS-related protein.
  
     0.662
ABS22873.1
KEGG: bce:BC3936 hypothetical cytosolic protein.
  
     0.657
ABS20790.1
KEGG: btl:BALH_0449 hypothetical protein.
  
     0.652
ABS22872.1
KEGG: bca:BCE_3982 hypothetical protein.
  
     0.651
Your Current Organism:
Bacillus cytotoxicus
NCBI taxonomy Id: 315749
Other names: B. cytotoxicus NVH 391-98, Bacillus cereus NVH 391-98, Bacillus cereus subsp. cytotoxicus NVH 391-98, Bacillus cereus subsp. cytotoxis NVH 391-98, Bacillus cytotoxicus NVH 391-98, Bacillus cytotoxicus str. NVH 391-98, Bacillus cytotoxicus strain NVH 391-98, Bacillus cytotoxis NVH 391-98
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.