STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS21477.1PFAM: peptidase M23B; KEGG: bat:BAS1339 peptidase, M23/M37 family. (414 aa)    
Predicted Functional Partners:
ABS23916.1
Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.800
ABS23964.1
PFAM: 3D domain protein; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: btl:BALH_4738 hypothetical protein.
 
  
 0.784
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
  
 0.748
ABS23991.1
PFAM: peptidase M23B; KEGG: btl:BALH_4787 stage II sporulation protein Q.
  
     0.733
ABS21665.1
CheC, inhibitor of MCP methylation; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: bca:BCE_1750 flagellar motor switch protein, putative.
  
   0.609
ABS21060.1
PFAM: S-layer domain protein; KEGG: bat:BAS0842 S-layer protein EA1.
 
  
 0.553
ABS21187.1
PFAM: S-layer domain protein; KEGG: bce:BC1126 S-layer homology domain.
 
  
 0.546
ABS20821.1
PFAM: glycosyl transferase family 51; KEGG: btl:BALH_0482 penicillin-binding protein 1A.
  
   
 0.545
ABS21594.1
TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Fibronectin type III domain protein; KEGG: baa:BA_2091 Transglycosyl, transglycosylase.
  
   
 0.532
ABS24074.1
TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bca:BCE_5504 penicillin-binding protein.
  
   
 0.523
Your Current Organism:
Bacillus cytotoxicus
NCBI taxonomy Id: 315749
Other names: B. cytotoxicus NVH 391-98, Bacillus cereus NVH 391-98, Bacillus cereus subsp. cytotoxicus NVH 391-98, Bacillus cereus subsp. cytotoxis NVH 391-98, Bacillus cytotoxicus NVH 391-98, Bacillus cytotoxicus str. NVH 391-98, Bacillus cytotoxicus strain NVH 391-98, Bacillus cytotoxis NVH 391-98
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