STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS22012.1KEGG: bcz:pE33L466_0390 hypothetical protein. (198 aa)    
Predicted Functional Partners:
ABS21548.1
KEGG: bca:BCE_1630 hypothetical protein.
  
     0.758
ABS22013.1
PFAM: metallophosphoesterase; KEGG: bcz:pE33L466_0391 possible DNA repair exonuclease.
 
     0.739
ABS23767.1
KEGG: bcz:BCZK4692 hypothetical protein.
  
     0.690
ABS20986.1
KEGG: btl:BALH_0694 hypothetical protein.
  
     0.681
ABS22652.1
KEGG: bce:BC3751 hypothetical protein.
  
     0.674
ABS22014.1
PFAM: Monogalactosyldiacylglycerol synthase; KEGG: bcz:pE33L466_0393 possible UDP-glucuronosyltransferase.
 
     0.664
ABS22183.1
TIGRFAM: Sporulation lipoprotein YhcN/YlaJ; KEGG: bca:BCE_2779 lipoprotein, putative.
  
     0.664
ABS22305.1
KEGG: bat:BAS2800 hypothetical protein.
  
     0.663
ABS21199.1
KEGG: btl:BALH_1011 spore germination protein PC.
  
     0.641
ABS21547.1
KEGG: bce:BC1502 hypothetical protein.
  
     0.641
Your Current Organism:
Bacillus cytotoxicus
NCBI taxonomy Id: 315749
Other names: B. cytotoxicus NVH 391-98, Bacillus cereus NVH 391-98, Bacillus cereus subsp. cytotoxicus NVH 391-98, Bacillus cereus subsp. cytotoxis NVH 391-98, Bacillus cytotoxicus NVH 391-98, Bacillus cytotoxicus str. NVH 391-98, Bacillus cytotoxicus strain NVH 391-98, Bacillus cytotoxis NVH 391-98
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.