STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS22052.1PFAM: Carboxymuconolactone decarboxylase; KEGG: bca:BCE_2018 carboxymuconolactone decarboxylase family protein. (102 aa)    
Predicted Functional Partners:
ABS22051.1
PFAM: 4-oxalocrotonate tautomerase; KEGG: bcz:BCZK1756 hypothetical protein.
 
   
 0.829
ABS22050.1
KEGG: bat:BAS1798 hypothetical protein.
 
     0.713
ABS22049.1
PFAM: regulatory protein LysR; KEGG: btk:BT9727_1771 transcriptional regulator, LysR family.
 
     0.524
ABS22030.1
3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bca:BCE_2381 2-hydroxy-3-oxopropionate reductase.
  
    0.509
ABS22974.1
PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: btk:BT9727_3784 3-hydroxyisobutyrate dehydrogenase.
  
    0.509
ABS20642.1
PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: ssp:SSP0164 putative permease of the major facilitator superfamily.
 
    0.459
ABS22053.1
Hypothetical protein.
       0.421
Your Current Organism:
Bacillus cytotoxicus
NCBI taxonomy Id: 315749
Other names: B. cytotoxicus NVH 391-98, Bacillus cereus NVH 391-98, Bacillus cereus subsp. cytotoxicus NVH 391-98, Bacillus cereus subsp. cytotoxis NVH 391-98, Bacillus cytotoxicus NVH 391-98, Bacillus cytotoxicus str. NVH 391-98, Bacillus cytotoxicus strain NVH 391-98, Bacillus cytotoxis NVH 391-98
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.