Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABS22398.1KEGG: bca:BCE_3390 hypothetical protein. (181 aa)    
Predicted Functional Partners:
ABS22399.1
KEGG: bcz:BCZK3065 possible ATP synthase protein I.
       0.500
ABS22364.1
KEGG: btl:BALH_2962 hypothetical protein.
  
  
 0.482
mqo
TIGRFAM: malate--quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase; KEGG: btl:BALH_2659 malate:quinone oxidoreductase.
       0.408
ABS22845.1
PFAM: protein of unknown function DUF1064; KEGG: ctc:CTC01079 hypothetical protein.
  
     0.407
ABS22400.1
PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: bca:BCE_3392 CBS domain protein.
       0.404
Your Current Organism:
Bacillus cytotoxicus
NCBI taxonomy Id: 315749
Other names: B. cytotoxicus NVH 391-98, Bacillus cereus NVH 391-98, Bacillus cereus subsp. cytotoxicus NVH 391-98, Bacillus cereus subsp. cytotoxis NVH 391-98, Bacillus cytotoxicus NVH 391-98, Bacillus cytotoxicus str. NVH 391-98, Bacillus cytotoxicus strain NVH 391-98, Bacillus cytotoxis NVH 391-98
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