Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABS22834.1 | ABS22835.1 | Bcer98_2600 | Bcer98_2601 | KEGG: cpr:CPR_C0022 hypothetical protein. | Hypothetical protein. | 0.723 |
ABS22834.1 | ABS22836.1 | Bcer98_2600 | Bcer98_2602 | KEGG: cpr:CPR_C0022 hypothetical protein. | KEGG: bce:BC1903 phage protein. | 0.723 |
ABS22835.1 | ABS22834.1 | Bcer98_2601 | Bcer98_2600 | Hypothetical protein. | KEGG: cpr:CPR_C0022 hypothetical protein. | 0.723 |
ABS22835.1 | ABS22836.1 | Bcer98_2601 | Bcer98_2602 | Hypothetical protein. | KEGG: bce:BC1903 phage protein. | 0.773 |
ABS22835.1 | ABS22837.1 | Bcer98_2601 | Bcer98_2603 | Hypothetical protein. | TIGRFAM: phage transcriptional regulator, ArpU family; KEGG: bca:BCE_2642 phage transcriptional regulator, ArpU family subfamily. | 0.408 |
ABS22836.1 | ABS22834.1 | Bcer98_2602 | Bcer98_2600 | KEGG: bce:BC1903 phage protein. | KEGG: cpr:CPR_C0022 hypothetical protein. | 0.723 |
ABS22836.1 | ABS22835.1 | Bcer98_2602 | Bcer98_2601 | KEGG: bce:BC1903 phage protein. | Hypothetical protein. | 0.773 |
ABS22836.1 | ABS22837.1 | Bcer98_2602 | Bcer98_2603 | KEGG: bce:BC1903 phage protein. | TIGRFAM: phage transcriptional regulator, ArpU family; KEGG: bca:BCE_2642 phage transcriptional regulator, ArpU family subfamily. | 0.408 |
ABS22837.1 | ABS22835.1 | Bcer98_2603 | Bcer98_2601 | TIGRFAM: phage transcriptional regulator, ArpU family; KEGG: bca:BCE_2642 phage transcriptional regulator, ArpU family subfamily. | Hypothetical protein. | 0.408 |
ABS22837.1 | ABS22836.1 | Bcer98_2603 | Bcer98_2602 | TIGRFAM: phage transcriptional regulator, ArpU family; KEGG: bca:BCE_2642 phage transcriptional regulator, ArpU family subfamily. | KEGG: bce:BC1903 phage protein. | 0.408 |