STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS23178.1TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: phage terminase large subunit; protein of unknown function DUF1545; KEGG: sab:SAB1726c phage-associated terminase large subunit. (434 aa)    
Predicted Functional Partners:
ABS23179.1
PFAM: Terminase small subunit; KEGG: bcl:ABC2840 terminase small subunit G1p.
 
  
 0.979
ABS23177.1
TIGRFAM: phage portal protein, SPP1 family; PFAM: phage portal protein SPP1; KEGG: llc:LACR_2108 hypothetical protein.
 
  
 0.956
ABS23176.1
TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family; PFAM: phage putative head morphogenesis protein SPP1 gp7; KEGG: cth:Cthe_2476 phage putative head morphogenesis protein, SPP1 gp7 family.
 
     0.913
ABS23175.1
KEGG: bha:BH3529 hypothetical protein.
 
    0.798
ABS23174.1
Hypothetical protein; KEGG: cpf:CPF_0956 putative phage major capsid protein.
 
    0.683
ABS23166.1
TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: sao:SAOUHSC_02182 tail length tape measure protein.
 
    0.613
ABS23165.1
TIGRFAM: phage putative tail component; KEGG: bcz:BCZK3412 hypothetical protein.
  
    0.542
ABS23164.1
TIGRFAM: phage minor structural protein; PFAM: Carbohydrate-binding CenC domain protein; KEGG: bce:BC1908 hypothetical protein.
 
    0.488
ABS23170.1
Hypothetical protein.
       0.477
ABS23171.1
KEGG: bld:BLi01475 hypothetical protein.
       0.477
Your Current Organism:
Bacillus cytotoxicus
NCBI taxonomy Id: 315749
Other names: B. cytotoxicus NVH 391-98, Bacillus cereus NVH 391-98, Bacillus cereus subsp. cytotoxicus NVH 391-98, Bacillus cereus subsp. cytotoxis NVH 391-98, Bacillus cytotoxicus NVH 391-98, Bacillus cytotoxicus str. NVH 391-98, Bacillus cytotoxicus strain NVH 391-98, Bacillus cytotoxis NVH 391-98
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