STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS23336.1TIGRFAM: LPXTG-motif cell wall anchor domain; PFAM: Cna B domain protein; KEGG: bce:BC2510 collagen adhesion protein. (745 aa)    
Predicted Functional Partners:
ABS23501.1
TIGRFAM: pyruvate kinase; PFAM: PEP-utilising protein mobile region; Pyruvate kinase barrel; Pyruvate kinase alpha/beta; KEGG: bca:BCE_4729 pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.923
ABS23337.1
TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: bce:BC2509 sortase.
 
   
 0.796
ABS20927.1
TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: bca:BCE_0755 LPXTG-site transpeptidase family protein.
 
   
 0.593
ABS23338.1
TIGRFAM: LPXTG-motif cell wall anchor domain; PFAM: surface protein from Gram-positive cocci anchor region; Cna B domain protein; KEGG: bce:BC2508 collagen adhesion protein.
 
    
0.580
ABS21043.1
KEGG: ppe:PEPE_0977 hypothetical protein.
  
     0.489
ABS21046.1
PFAM: protein of unknown function DUF916 cell surface putative; KEGG: bcz:BCZK0769 conserved hypothetical protein; possible cell surface protein.
 
     0.479
ABS21884.1
KEGG: btk:BT9727_1913 hypothetical protein.
  
     0.442
ABS21136.1
PFAM: protein of unknown function DUF214; KEGG: bca:BCE_2758 permease, putative.
  
    0.414
Your Current Organism:
Bacillus cytotoxicus
NCBI taxonomy Id: 315749
Other names: B. cytotoxicus NVH 391-98, Bacillus cereus NVH 391-98, Bacillus cereus subsp. cytotoxicus NVH 391-98, Bacillus cereus subsp. cytotoxis NVH 391-98, Bacillus cytotoxicus NVH 391-98, Bacillus cytotoxicus str. NVH 391-98, Bacillus cytotoxicus strain NVH 391-98, Bacillus cytotoxis NVH 391-98
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