STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPUM_1137Ribosomal-protein-serine acetyltransferase. (187 aa)    
Predicted Functional Partners:
BPUM_0481
Aminoglycoside adenylyltransferase.
  
  
  0.788
BPUM_1138
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.773
BPUM_0585
Alanine acetyltransferase.
  
     0.753
BPUM_1199
Hypothetical protein.
  
     0.748
BPUM_1814
Glutamate synthase.
   
 
  0.690
BPUM_2621
Chorismate mutase; Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate.
    
  0.687
BPUM_0876
Carbon-nitrogen hydrolase.
    
  0.565
BPUM_1139
MFS transporter.
       0.534
BPUM_1140
Acetyltransferase.
 
     0.534
BPUM_1136
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
       0.524
Your Current Organism:
Bacillus pumilus
NCBI taxonomy Id: 315750
Other names: B. pumilus SAFR-032, Bacillus pumilus SAFR-032, Bacillus pumilus str. SAFR-032, Bacillus pumilus strain SAFR-032
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