STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPUM_2234Hypothetical protein. (100 aa)    
Predicted Functional Partners:
BPUM_2232
Hypothetical protein.
 
   
 0.804
BPUM_1983
Hypothetical protein.
  
     0.773
BPUM_0143
Deoxyguanosinetriphosphate triphosphohydrolase.
  
     0.772
racA
MerR family transcriptional regulator; Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure; Belongs to the RacA family.
  
     0.770
BPUM_2890
Endospore coat-associated protein.
  
     0.761
BPUM_2568
Sporulation protein.
  
     0.760
BPUM_1296
Chemotaxis protein CheV.
  
  
  0.752
BPUM_2451
Hypothetical protein.
  
     0.751
BPUM_1965
Hypothetical protein.
  
     0.750
BPUM_1691
Sporulation inhibitor of replication protein SirA.
  
     0.746
Your Current Organism:
Bacillus pumilus
NCBI taxonomy Id: 315750
Other names: B. pumilus SAFR-032, Bacillus pumilus SAFR-032, Bacillus pumilus str. SAFR-032, Bacillus pumilus strain SAFR-032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.