STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPUM_3226dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (353 aa)    
Predicted Functional Partners:
BPUM_3227
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
 
 0.995
BPUM_3426
Spore coat protein.
 
 
 0.982
BPUM_3427
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.980
BPUM_3429
Glucose-1-phosphate thymidylyltransferase.
 
 
 0.969
BPUM_3223
Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.865
BPUM_3208
UDP-glucose 6-dehydrogenase.
 
 
 0.807
BPUM_3276
UDP-glucose 6-dehydrogenase.
 
 
 0.807
BPUM_0676
Glucose-1-phosphate cytidylyltransferase.
  
 
 0.784
BPUM_3234
CDP-glycerol--glycerophosphate glycerophosphotransferase.
  
 
 0.760
BPUM_3210
Sulfur relay protein TusB.
  
  
 0.752
Your Current Organism:
Bacillus pumilus
NCBI taxonomy Id: 315750
Other names: B. pumilus SAFR-032, Bacillus pumilus SAFR-032, Bacillus pumilus str. SAFR-032, Bacillus pumilus strain SAFR-032
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