STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_0024KEGG: rpc:RPC_0021 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase. (586 aa)    
Predicted Functional Partners:
gshB
KEGG: rpa:RPA0322 glutathione synthetase; TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase domain protein; glutathione synthetase, ATP-binding; RimK domain protein ATP-grasp; Belongs to the prokaryotic GSH synthase family.
 
  
 0.933
RPE_1368
KEGG: rpc:RPC_1352 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase.
  
  
 
0.922
RPE_1989
NADPH-glutathione reductase; Maintains high levels of reduced glutathione.
     
 0.920
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.919
RPE_2397
Glutathione peroxidase; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: glutathione peroxidase; KEGG: bja:bll4149 putative glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.917
RPE_3703
PFAM: glutathione peroxidase; KEGG: rpc:RPC_3665 glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.917
RPE_3758
PFAM: peptidase M17, leucyl aminopeptidase domain protein; KEGG: rpc:RPC_3720 leucyl aminopeptidase; Belongs to the peptidase M17 family.
     
 0.916
RPE_3037
TIGRFAM: conserved hypothetical protein; PFAM: Allophanate hydrolase subunit 1; KEGG: rpc:RPC_2624 hypothetical protein.
   
 
  0.910
RPE_4828
ChaC family protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
   
 
 0.904
RPE_1706
Redoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
     
 0.903
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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