STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_0150PFAM: Methyltransferase type 11; KEGG: rpc:RPC_0522 methyltransferase. (279 aa)    
Predicted Functional Partners:
RPE_1433
PFAM: protein of unknown function DUF185; KEGG: rpc:RPC_1412 protein of unknown function DUF185.
  
    0.749
RPE_2913
PFAM: ETC complex I subunit conserved region; KEGG: rpb:RPB_2935 ETC complex I subunit conserved region.
  
     0.748
RPE_2529
NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
  
   
 0.718
RPE_2904
KEGG: rpc:RPC_2773 phytoene synthase.
 
   
 0.680
RPE_0151
KEGG: rpd:RPD_0108 hypothetical protein.
       0.675
nuoI2
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
   
 0.635
RPE_3768
PFAM: cytochrome c, class I; KEGG: rpc:RPC_3730 cytochrome c, class I.
  
  
 0.617
RPE_0505
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KEGG: rpc:RPC_0437 NAD-dependent epimerase/dehydratase.
 
     0.584
RPE_1341
PFAM: cytochrome c, class I; KEGG: rpc:RPC_1307 cytochrome c, class I.
  
  
 0.551
RPE_0152
PFAM: phosphoribosyltransferase; KEGG: rpd:RPD_0107 phosphoribosyltransferase.
  
    0.523
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.