STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloBHydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (255 aa)    
Predicted Functional Partners:
RPE_2920
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpc:RPC_2794 glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.969
RPE_0233
PFAM: beta-lactamase domain protein; KEGG: rpb:RPB_0715 beta-lactamase-like.
  
  
0.914
RPE_2140
PFAM: FAD linked oxidase domain protein; KEGG: rpc:RPC_3276 FAD linked oxidase-like.
    
 0.905
RPE_0165
PFAM: protein of unknown function DUF985; KEGG: rpc:RPC_0507 protein of unknown function DUF985.
       0.875
RPE_1620
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: rpd:RPD_1760 glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
  
 0.664
RPE_0163
PFAM: Methyltransferase type 11; KEGG: rpc:RPC_0509 methyltransferase type 11.
     
 0.650
RPE_0254
PFAM: Glutathione S-transferase, N-terminal domain; KEGG: nha:Nham_0039 glutathione S-transferase-like.
  
 
 
 0.495
RPE_4106
PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: rpc:RPC_3978 protein of unknown function DUF882.
  
    0.491
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
 
 0.462
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.447
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.