STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_0544PFAM: extracellular solute-binding protein, family 1; KEGG: rpc:RPC_0097 extracellular solute-binding protein, family 1. (430 aa)    
Predicted Functional Partners:
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.993
RPE_0438
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_0406 binding-protein-dependent transport systems inner membrane component.
 
 0.991
ugpC
ABC transporter related; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 0.975
RPE_0440
PFAM: extracellular solute-binding protein, family 1; KEGG: rpc:RPC_0404 extracellular solute-binding protein, family 1.
  
  
 
0.904
RPE_3684
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3644 binding-protein-dependent transport systems inner membrane component.
 
 
 0.888
RPE_3685
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3645 binding-protein-dependent transport systems inner membrane component.
 
 
 0.880
RPE_1382
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_1365 binding-protein-dependent transport systems inner membrane component.
  
 
 0.855
RPE_3687
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpc:RPC_3647 ABC transporter related.
 
 
 0.855
RPE_1381
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_4214 binding-protein-dependent transport systems inner membrane component.
  
 
 0.812
RPE_1379
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpc:RPC_1362 ABC transporter related.
  
 
 0.790
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.