STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_0710TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: rpd:RPD_4352 flavoprotein WrbA. (199 aa)    
Predicted Functional Partners:
ubiE
Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
RPE_0977
PFAM: Ferritin, Dps family protein; KEGG: rpa:RPA1274 possible Dps protein family starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.744
RPE_3091
PFAM: Ferritin, Dps family protein; KEGG: rpa:RPA2755 possible DNA-binding stress protein; Belongs to the Dps family.
  
  
 0.744
RPE_0433
KEGG: rpc:RPC_2948 hypothetical protein.
   
  
 0.616
RPE_1683
KEGG: rpc:RPC_1653 hypothetical protein.
   
  
 0.616
RPE_3049
KEGG: rpc:RPC_2948 hypothetical protein.
   
  
 0.616
RPE_4371
KEGG: rpb:RPB_1632 hypothetical protein.
   
  
 0.616
RPE_4373
KEGG: rpc:RPC_2948 hypothetical protein.
   
  
 0.616
RPE_4592
PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: rpc:RPC_1138 chaperone DnaJ-like.
  
  
 0.614
RPE_1728
PFAM: CBS domain containing protein; transport-associated; KEGG: rpc:RPC_4051 putative signal-transduction protein with CBS domains.
  
 
 0.591
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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