STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_1397KEGG: nha:Nham_1099 hypothetical protein. (181 aa)    
Predicted Functional Partners:
RPE_1873
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_1780 peptidoglycan-binding domain 1.
  
     0.692
RPE_1871
KEGG: rpc:RPC_1778 hypothetical protein.
  
     0.685
RPE_2355
KEGG: rpc:RPC_3110 hypothetical protein.
  
     0.651
RPE_1474
KEGG: rpc:RPC_1455 hypothetical protein.
  
     0.644
RPE_0142
KEGG: rpd:RPD_0295 hypothetical protein.
  
     0.627
RPE_4166
KEGG: rpd:RPD_3912 hypothetical protein.
  
     0.627
RPE_0389
KEGG: rpc:RPC_0285 hypothetical protein.
  
     0.622
RPE_4819
PFAM: acyltransferase 3; KEGG: rpc:RPC_4855 acyltransferase 3.
  
     0.613
RPE_4919
KEGG: rpc:RPC_4942 hypothetical protein.
  
     0.606
RPE_1843
Hypothetical protein; TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_1748 twin-arginine translocation pathway signal.
  
     0.580
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.